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LOC115207634 glycogen [starch] synthase, muscle-like [ Salmo trutta (river trout) ]

Gene ID: 115207634, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115207634
Gene description
glycogen [starch] synthase, muscle-like
See related
Ensembl:ENSSTUG00000001081
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 1 NC_042957.1 (74512676..74537104, complement)

Chromosome 1 - NC_042957.1Genomic Context describing neighboring genes Neighboring gene lysoplasmalogenase-like Neighboring gene putative L-aspartate dehydrogenase Neighboring gene basic leucine zipper and W2 domain-containing protein 1-A pseudogene Neighboring gene DNA polymerase delta catalytic subunit-like Neighboring gene B-cell receptor CD22-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042957.1 Chromosome 1 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen (starch) synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, muscle-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042957.1 Reference fSalTru1.1 Primary Assembly

    Range
    74512676..74537104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029774925.1 → XP_029630785.1  glycogen [starch] synthase, muscle-like

    UniProtKB/TrEMBL
    A0A673VQ25, A0A673VRC8, A0A674E3W8
    Related
    ENSSTUP00000002230.1, ENSSTUT00000002383.1
    Conserved Domains (1) summary
    cd03793
    Location:26 → 615
    GT3_GSY2-like; glycogen synthase GSY2 and similar proteins

RNA

  1. XR_003881032.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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