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c1galt1c1 C1GALT1-specific chaperone 1 [ Salmo trutta (river trout) ]

Gene ID: 115205070, updated on 17-Mar-2024

Summary

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Gene symbol
c1galt1c1
Gene description
C1GALT1-specific chaperone 1
See related
Ensembl:ENSSTUG00000002910
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 13 NC_042969.1 (3263857..3267395, complement)

Chromosome 13 - NC_042969.1Genomic Context describing neighboring genes Neighboring gene malignant T-cell-amplified sequence 1-A-like Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene protein eva-1 homolog C-like Neighboring gene chloride intracellular channel 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042969.1 Chromosome 13 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042969.1 Reference fSalTru1.1 Primary Assembly

    Range
    3263857..3267395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029770654.1 → XP_029626514.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A673WAY0

  2. XM_029770653.1 → XP_029626513.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A673WAY0

  3. XM_029770651.1 → XP_029626511.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A673WAY0
    Related
    ENSSTUP00000005892.1, ENSSTUT00000006260.1
Nucleotide Protein
Heading Accession and Version

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