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LOC115201688 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like [ Salmo trutta (river trout) ]

Gene ID: 115201688, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115201688
Gene description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like
See related
Ensembl:ENSSTUG00000022869
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115201688 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 10 NC_042966.1 (38163819..38185463, complement)

Chromosome 10 - NC_042966.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115201687 Neighboring gene serine/threonine-protein kinase LMTK1-like Neighboring gene tryptase-like Neighboring gene uncharacterized LOC115200866

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042966.1 Chromosome 10 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042966.1 Reference fSalTru1.1 Primary Assembly

    Range
    38163819..38185463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029765511.1 → XP_029621371.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like

    UniProtKB/TrEMBL
    A0A674A3Z9
    Related
    ENSSTUP00000053958.1, ENSSTUT00000056431.1
    Conserved Domains (1) summary
    pfam00777
    Location:183 → 469
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases