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galnt2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [ Salmo trutta (river trout) ]

Gene ID: 115201477, updated on 17-Mar-2024

Summary

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Gene symbol
galnt2
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSSTUG00000001273
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 10 NC_042966.1 (26713194..26809030)

Chromosome 10 - NC_042966.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 10 Neighboring gene URB2 ribosome biogenesis homolog Neighboring gene piggyBac transposable element derived 5 Neighboring gene component of oligomeric golgi complex 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042966.1 Chromosome 10 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042966.1 Reference fSalTru1.1 Primary Assembly

    Range
    26713194..26809030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029765131.1 → XP_029620991.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A674D0Q2
    Conserved Domains (2) summary
    cd02510
    Location:128 → 423
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:435 → 558
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_029765132.1 → XP_029620992.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A673W480, A0A674D0Q2
    Related
    ENSSTUP00000003011.1, ENSSTUT00000003201.1
    Conserved Domains (2) summary
    cd02510
    Location:128 → 423
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:435 → 552
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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