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LOC115198707 heparan sulfate glucosamine 3-O-sulfotransferase 4-like [ Salmo trutta (river trout) ]

Gene ID: 115198707, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115198707
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 4-like
See related
Ensembl:ENSSTUG00000000245
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115198707 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 1 NC_042957.1 (50358991..50460222, complement)

Chromosome 1 - NC_042957.1Genomic Context describing neighboring genes Neighboring gene non-structural maintenance of chromosomes element 1 homolog Neighboring gene lysine-specific demethylase 8-like Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 2-like Neighboring gene uncharacterized LOC115203645

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042957.1 Chromosome 1 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042957.1 Reference fSalTru1.1 Primary Assembly

    Range
    50358991..50460222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029760872.1 → XP_029616732.1  heparan sulfate glucosamine 3-O-sulfotransferase 4-like

    UniProtKB/TrEMBL
    A0A673VJG1
    Related
    ENSSTUP00000000334.1, ENSSTUT00000000380.1
    Conserved Domains (1) summary
    pfam00685
    Location:159 → 396
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases