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LOC115192463 zinc finger protein 774-like [ Salmo trutta (river trout) ]

Gene ID: 115192463, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115192463
Gene description
zinc finger protein 774-like
See related
Ensembl:ENSSTUG00000019025
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115192463 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 4 NC_042960.1 (45882538..45901326)

Chromosome 4 - NC_042960.1Genomic Context describing neighboring genes Neighboring gene transglutaminase 1 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1-like Neighboring gene polymeric immunoglobulin receptor-like Neighboring gene CMRF35-like molecule 1 Neighboring gene histamine H3 receptor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042960.1 Chromosome 4 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 774-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042960.1 Reference fSalTru1.1 Primary Assembly

    Range
    45882538..45901326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029750979.1 → XP_029606839.1  zinc finger protein 774-like isoform X1

    UniProtKB/TrEMBL
    A0A673ZCX7

  2. XM_029750982.1 → XP_029606842.1  zinc finger protein 774-like isoform X3

  3. XM_029750981.1 → XP_029606841.1  zinc finger protein 774-like isoform X2

  4. XM_029750983.1 → XP_029606843.1  zinc finger protein 774-like isoform X3

    Conserved Domains (2) summary
    COG5048
    Location:225 → 379
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:235 → 255
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_029750980.1 → XP_029606840.1  zinc finger protein 774-like isoform X1

    UniProtKB/TrEMBL
    A0A673ZCX7
    Related
    ENSSTUP00000045149.1, ENSSTUT00000047114.1
Nucleotide Protein
Heading Accession and Version

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