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LOC115183712 oocyte zinc finger protein XlCOF26-like [ Salmo trutta (river trout) ]

Gene ID: 115183712, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115183712
Gene description
oocyte zinc finger protein XlCOF26-like
See related
Ensembl:ENSSTUG00000031855
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115183712 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 3 NC_042959.1 (64696686..64700949, complement)

Chromosome 3 - NC_042959.1Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042959.1 Chromosome 3 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oocyte zinc finger protein XlCOF26-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042959.1 Reference fSalTru1.1 Primary Assembly

    Range
    64696686..64700949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029744786.1 → XP_029600646.1  oocyte zinc finger protein XlCOF26-like

    UniProtKB/TrEMBL
    A0A674BPE9
    Related
    ENSSTUP00000072896.1, ENSSTUT00000077368.1
    Conserved Domains (2) summary
    sd00017
    Location:269 → 288
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:308 → 332
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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