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LOC115178596 gastrula zinc finger protein XlCGF57.1-like [ Salmo trutta (river trout) ]

Gene ID: 115178596, updated on 17-Nov-2020

Summary

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Gene symbol
LOC115178596
Gene description
gastrula zinc finger protein XlCGF57.1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115178596 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 38 NC_042994.1 (31778889..31798426)

Chromosome 38 - NC_042994.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 239-like Neighboring gene zinc finger protein 501-like Neighboring gene uncharacterized LOC115177714 Neighboring gene zinc finger protein 501-like Neighboring gene gastrula zinc finger protein XlCGF17.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042994.1 Chromosome 38 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF57.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042994.1 Reference fSalTru1.1 Primary Assembly

    Range
    31778889..31798426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029739850.1 → XP_029595710.1  gastrula zinc finger protein XlCGF57.1-like

    Conserved Domains (2) summary
    COG5048
    Location:45 → 502
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:159 → 179
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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