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LOC115178088 zinc finger protein 239-like [ Salmo trutta (river trout) ]

Gene ID: 115178088, updated on 17-Nov-2020

Summary

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Gene symbol
LOC115178088
Gene description
zinc finger protein 239-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115178088 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 38 NC_042994.1 (33656232..33668926)

Chromosome 38 - NC_042994.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115178107 Neighboring gene zinc finger protein 239-like Neighboring gene zinc finger protein 271-like Neighboring gene gastrula zinc finger protein XlCGF26.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042994.1 Chromosome 38 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein 239-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042994.1 Reference fSalTru1.1 Primary Assembly

    Range
    33656232..33668926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029739125.1 → XP_029594985.1  zinc finger protein 239-like

    Conserved Domains (4) summary
    COG5048
    Location:236 → 320
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:179 → 252
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:101 → 121
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:169 → 194
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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