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LOC115177980 zinc finger protein 180-like [ Salmo trutta (river trout) ]

Gene ID: 115177980, updated on 17-Nov-2020

Summary

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Gene symbol
LOC115177980
Gene description
zinc finger protein 180-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115177980 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 38 NC_042994.1 (24254788..24262630)

Chromosome 38 - NC_042994.1Genomic Context describing neighboring genes Neighboring gene trichohyalin-like Neighboring gene uncharacterized LOC115177960 Neighboring gene uncharacterized LOC115177988 Neighboring gene myosin heavy chain, fast skeletal muscle-like Neighboring gene myosin heavy chain, fast skeletal muscle-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042994.1 Chromosome 38 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein 180-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042994.1 Reference fSalTru1.1 Primary Assembly

    Range
    24254788..24262630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029738993.1 → XP_029594853.1  zinc finger protein 180-like

    Conserved Domains (2) summary
    COG5048
    Location:24 → 378
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:302 → 322
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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