U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC115177667 uronyl 2-sulfotransferase-like [ Salmo trutta (river trout) ]

Gene ID: 115177667, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC115177667
Gene description
uronyl 2-sulfotransferase-like
See related
Ensembl:ENSSTUG00000011441
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC115177667 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 1 NC_042957.1 (19618414..19732411, complement)

Chromosome 1 - NC_042957.1Genomic Context describing neighboring genes Neighboring gene methyltransferase like 24 Neighboring gene solute carrier family 22 member 16-like Neighboring gene uncharacterized LOC115177819 Neighboring gene SAM and SH3 domain-containing protein 1-like Neighboring gene uncharacterized LOC115178239 Neighboring gene ankyrin repeat and SOCS box protein 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042957.1 Chromosome 1 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uronyl 2-sulfotransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042957.1 Reference fSalTru1.1 Primary Assembly

    Range
    19618414..19732411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029738649.1 → XP_029594509.1  uronyl 2-sulfotransferase-like

    UniProtKB/TrEMBL
    A0A673XQ03, A0A673XXC4
    Related
    ENSSTUP00000026320.1, ENSSTUT00000027576.1
    Conserved Domains (1) summary
    cl22970
    Location:99 → 344
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases