U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC115175908 chitin synthase chs-2-like [ Salmo trutta (river trout) ]

Gene ID: 115175908, updated on 26-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC115175908
Gene description
chitin synthase chs-2-like
See related
Ensembl:ENSSTUG00000032547
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC115175908 in Genome Data Viewer
Location:
chromosome: 36
Exon count:
19
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 36 NC_042992.1 (32559440..32576137)

Chromosome 36 - NC_042992.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115176225 Neighboring gene uncharacterized LOC115176228 Neighboring gene retinoic acid receptor RXR-beta-A-like Neighboring gene collagen alpha-2(XI) chain-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042992.1 Chromosome 36 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chitin synthase chs-2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042992.1 Reference fSalTru1.1 Primary Assembly

    Range
    32559440..32576137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029735539.1 → XP_029591399.1  chitin synthase chs-2-like

    UniProtKB/TrEMBL
    A0A674BSP3, A0A674BT08
    Related
    ENSSTUP00000074237.1, ENSSTUT00000078873.1
    Conserved Domains (2) summary
    cd04190
    Location:486 → 815
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
    pfam03142
    Location:658 → 991
    Chitin_synth_2; Chitin synthase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases