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LOC115174890 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like [ Salmo trutta (river trout) ]

Gene ID: 115174890, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115174890
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like
See related
Ensembl:ENSSTUG00000033464
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115174890 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 35 NC_042991.1 (23237088..23308281, complement)

Chromosome 35 - NC_042991.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase-like 4 Neighboring gene endoribonuclease ZC3H12A-like Neighboring gene cyclin-dependent kinase 19-like Neighboring gene uncharacterized LOC115174894 Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042991.1 Chromosome 35 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042991.1 Reference fSalTru1.1 Primary Assembly

    Range
    23237088..23308281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029733887.1 → XP_029589747.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A674BXT4, A0A674BYR4

  2. XM_029733888.1 → XP_029589748.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A674BXT4, A0A674BYR4

  3. XM_029733890.1 → XP_029589750.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A674BYR4

  4. XM_029733886.1 → XP_029589746.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A674BXT4, A0A674BYR4
    Related
    ENSSTUP00000076226.1, ENSSTUT00000081027.1
    Conserved Domains (3) summary
    smart00547
    Location:779 → 802
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:780 → 799
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  5. XM_029733892.1 → XP_029589752.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X4

    UniProtKB/TrEMBL
    A0A674BYR4
    Related
    ENSSTUP00000076264.1, ENSSTUT00000081081.1
    Conserved Domains (3) summary
    smart00547
    Location:740 → 763
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:741 → 760
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  6. XM_029733891.1 → XP_029589751.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A674BYA4, A0A674BYR4
    Related
    ENSSTUP00000076253.1, ENSSTUT00000081065.1
    Conserved Domains (3) summary
    smart00547
    Location:745 → 768
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:746 → 765
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  7. XM_029733893.1 → XP_029589753.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X5

    UniProtKB/TrEMBL
    A0A674BYR4
Nucleotide Protein
Heading Accession and Version

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