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galnt14 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [ Salmo trutta (river trout) ]

Gene ID: 115174773, updated on 17-Mar-2024

Summary

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Gene symbol
galnt14
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
See related
Ensembl:ENSSTUG00000044847
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
zebrafish all
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Genomic context

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See galnt14 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 35 NC_042991.1 (18326133..18442073)

Chromosome 35 - NC_042991.1Genomic Context describing neighboring genes Neighboring gene protein stum homolog Neighboring gene EH domain-containing protein 3-like Neighboring gene angel homolog 2 (Drosophila) Neighboring gene vasohibin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042991.1 Chromosome 35 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 14-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042991.1 Reference fSalTru1.1 Primary Assembly

    Range
    18326133..18442073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029733656.1 → XP_029589516.1  polypeptide N-acetylgalactosaminyltransferase 14-like

    UniProtKB/TrEMBL
    A0A674E104, A0A674E150
    Related
    ENSSTUP00000101703.1, ENSSTUT00000109089.1
    Conserved Domains (2) summary
    cd02510
    Location:115 → 409
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:422 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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