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galnt15 polypeptide N-acetylgalactosaminyltransferase 15 [ Salmo trutta (river trout) ]

Gene ID: 115173967, updated on 21-Dec-2023

Summary

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Gene symbol
galnt15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
Ensembl:ENSSTUG00000019842
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See galnt15 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 34 NC_042990.1 (29087763..29099999)

Chromosome 34 - NC_042990.1Genomic Context describing neighboring genes Neighboring gene insulin-like growth factor 2 mRNA binding protein 3 Neighboring gene glycoprotein (transmembrane) nmb Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene oxidoreductase NAD-binding domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042990.1 Chromosome 34 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042990.1 Reference fSalTru1.1 Primary Assembly

    Range
    29087763..29099999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029732503.1 → XP_029588363.1  polypeptide N-acetylgalactosaminyltransferase 15

    UniProtKB/TrEMBL
    A0A673ZK13, A0A673ZK47
    Related
    ENSSTUP00000047193.1, ENSSTUT00000049226.1
    Conserved Domains (2) summary
    cd02510
    Location:191 → 488
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:501 → 640
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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