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LOC115170090 C1GALT1-specific chaperone 1-like [ Salmo trutta (river trout) ]

Gene ID: 115170090, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115170090
Gene description
C1GALT1-specific chaperone 1-like
See related
Ensembl:ENSSTUG00000020369
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115170090 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 3 NC_042959.1 (21021223..21023290, complement)

Chromosome 3 - NC_042959.1Genomic Context describing neighboring genes Neighboring gene cullin-4B-like Neighboring gene MCTS1 re-initiation and release factor Neighboring gene chloride intracellular channel protein 2-like Neighboring gene uncharacterized LOC115164753

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042959.1 Chromosome 3 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042959.1 Reference fSalTru1.1 Primary Assembly

    Range
    21021223..21023290 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029726378.1 → XP_029582238.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A673ZNJ5

  2. XM_029726368.1 → XP_029582228.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A673ZNJ5
    Related
    ENSSTUP00000048428.1, ENSSTUT00000050517.1
Nucleotide Protein
Heading Accession and Version

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