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LOC115169726 dnaJ homolog subfamily B member 6-like [ Salmo trutta (river trout) ]

Gene ID: 115169726, updated on 25-Jan-2024

Summary

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Gene symbol
LOC115169726
Gene description
dnaJ homolog subfamily B member 6-like
See related
Ensembl:ENSSTUG00000011097
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115169726 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 31 NC_042987.1 (20248205..20265710, complement)

Chromosome 31 - NC_042987.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 10-B-like Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene transient receptor potential cation channel subfamily A member 1-like Neighboring gene tiggy-winkle hedgehog protein-like Neighboring gene uncharacterized LOC115169729 Neighboring gene protein canopy-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042987.1 Chromosome 31 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042987.1 Reference fSalTru1.1 Primary Assembly

    Range
    20248205..20265710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029725630.1 → XP_029581490.1  dnaJ homolog subfamily B member 6-like isoform X1

    UniProtKB/TrEMBL
    A0A673XMF2
    Related
    ENSSTUP00000025434.1, ENSSTUT00000026658.1

  2. XM_029725631.1 → XP_029581491.1  dnaJ homolog subfamily B member 6-like isoform X2

    UniProtKB/TrEMBL
    A0A673XMJ2
    Related
    ENSSTUP00000025450.1, ENSSTUT00000026675.1
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 139
    PRK10767; chaperone protein DnaJ; Provisional

  3. XM_029725632.1 → XP_029581492.1  dnaJ homolog subfamily B member 6-like isoform X3

    Conserved Domains (1) summary
    PRK10767
    Location:4 → 139
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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