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LOC115168242 properdin-like [ Salmo trutta (river trout) ]

Gene ID: 115168242, updated on 2-Sep-2022

Summary

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Gene symbol
LOC115168242
Gene description
properdin-like
See related
Ensembl:ENSSTUG00000021614
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115168242 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 30 NC_042986.1 (21543447..21547066)

Chromosome 30 - NC_042986.1Genomic Context describing neighboring genes Neighboring gene rho-related GTP-binding protein RhoA-C Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial-like Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene TBC1 domain family, member 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042986.1 Chromosome 30 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
properdin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042986.1 Reference fSalTru1.1 Primary Assembly

    Range
    21543447..21547066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029723329.1 → XP_029579189.1  properdin-like

    UniProtKB/TrEMBL
    A0A673ZX08
    Related
    ENSSTUP00000051232.1, ENSSTUT00000053577.1
    Conserved Domains (3) summary
    smart00209
    Location:130 → 182
    TSP1; Thrombospondin type 1 repeats
    pfam18487
    Location:21 → 66
    TSR; Thrombospondin type 1 repeat
    cl15278
    Location:373 → 444
    TSP_1; Thrombospondin type 1 domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases