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LOC115166703 beta-1,3-galactosyltransferase 1-like [ Salmo trutta (river trout) ]

Gene ID: 115166703, updated on 14-Nov-2024

Summary

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Gene symbol
LOC115166703
Gene description
beta-1,3-galactosyltransferase 1-like
See related
Ensembl:ENSSTUG00000034173
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115166703 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 29 NC_042985.1 (414849..418626)

Chromosome 29 - NC_042985.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily G member 4-like Neighboring gene beta-1,3-galactosyltransferase 1-like Neighboring gene interleukin-17C-like Neighboring gene collagen alpha-1(I) chain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042985.1 Chromosome 29 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042985.1 Reference fSalTru1.1 Primary Assembly

    Range
    414849..418626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029720419.1 → XP_029576279.1  beta-1,3-galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A674C2D2
    Related
    ENSSTUP00000077501.1, ENSSTUT00000082542.1
    Conserved Domains (1) summary
    cl21608
    Location:184 → 376
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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