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LOC115161273 beta-galactoside alpha-2,6-sialyltransferase 2-like [ Salmo trutta (river trout) ]

Gene ID: 115161273, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115161273
Gene description
beta-galactoside alpha-2,6-sialyltransferase 2-like
See related
Ensembl:ENSSTUG00000013426
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: 24
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 24 NC_042980.1 (39208374..39279700, complement)

Chromosome 24 - NC_042980.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit A-like Neighboring gene ECRG4 augurin precursor a Neighboring gene UDP-glucuronate decarboxylase 1 Neighboring gene teleost multiple tissue opsin 2b Neighboring gene uncharacterized LOC115161534 Neighboring gene uncharacterized LOC115161535

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042980.1 Chromosome 24 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactoside alpha-2,6-sialyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042980.1 Reference fSalTru1.1 Primary Assembly

    Range
    39208374..39279700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029712110.1 → XP_029567970.1  beta-galactoside alpha-2,6-sialyltransferase 2-like

    UniProtKB/TrEMBL
    A0A673Y994, A0A673Y9A2
    Related
    ENSSTUP00000031131.1, ENSSTUT00000032550.1
    Conserved Domains (1) summary
    pfam00777
    Location:322 → 524
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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