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LOC115159138 procollagen galactosyltransferase 2-like [ Salmo trutta (river trout) ]

Gene ID: 115159138, updated on 18-Aug-2023

Summary

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Gene symbol
LOC115159138
Gene description
procollagen galactosyltransferase 2-like
See related
Ensembl:ENSSTUG00000009844
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115159138 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 23 NC_042979.1 (4978841..4995874, complement)

Chromosome 23 - NC_042979.1Genomic Context describing neighboring genes Neighboring gene dopamine beta-hydroxylase-like Neighboring gene sarcosine dehydrogenase Neighboring gene ubiquitin related modifier 1 Neighboring gene SH2 domain containing 3Ca

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042979.1 Chromosome 23 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
procollagen galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042979.1 Reference fSalTru1.1 Primary Assembly

    Range
    4978841..4995874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029708575.1 → XP_029564435.1  procollagen galactosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A673XM94, A0A673XMB9
    Related
    ENSSTUP00000022493.1, ENSSTUT00000023612.1
    Conserved Domains (1) summary
    cl01298
    Location:321 → 506
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
Nucleotide Protein
Heading Accession and Version

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