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tor1aip2 torsin 1A interacting protein 2 [ Salmo trutta (river trout) ]

Gene ID: 115158846, updated on 21-Dec-2023

Summary

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Gene symbol
tor1aip2
Gene description
torsin 1A interacting protein 2
See related
Ensembl:ENSSTUG00000029302
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See tor1aip2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 22 NC_042978.1 (46511307..46524718)

Chromosome 22 - NC_042978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115158834 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6 Neighboring gene uncharacterized LOC115158857

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042978.1 Chromosome 22 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042978.1 Reference fSalTru1.1 Primary Assembly

    Range
    46511307..46524718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029708222.1 → XP_029564082.1  torsin-1A-interacting protein 2 isoform X2

    Conserved Domains (2) summary
    TIGR00927
    Location:2 → 252
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam05609
    Location:293 → 508
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_029708223.1 → XP_029564083.1  torsin-1A-interacting protein 2 isoform X3

    Conserved Domains (3) summary
    PRK13108
    Location:12 → 187
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
    pfam05609
    Location:246 → 461
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
    pfam16058
    Location:37 → 117
    Mucin-like

  3. XM_029708224.1 → XP_029564084.1  torsin-1A-interacting protein 2 isoform X4

  4. XM_029708221.1 → XP_029564081.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A674B6G6
    Related
    ENSSTUP00000066995.1, ENSSTUT00000071028.1
    Conserved Domains (2) summary
    TIGR00927
    Location:2 → 288
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam05609
    Location:329 → 544
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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