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LOC115154245 E3 ubiquitin-protein ligase CBL-like [ Salmo trutta (river trout) ]

Gene ID: 115154245, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115154245
Gene description
E3 ubiquitin-protein ligase CBL-like
See related
Ensembl:ENSSTUG00000002677
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115154245 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 19 NC_042975.1 (26553643..26574870, complement)

Chromosome 19 - NC_042975.1Genomic Context describing neighboring genes Neighboring gene protein MIS12 homolog Neighboring gene cell surface glycoprotein MUC18-like Neighboring gene DNA-directed RNA polymerase II subunit RPB11-a-like Neighboring gene alkB homolog 4, lysine demthylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042975.1 Chromosome 19 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase CBL-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042975.1 Reference fSalTru1.1 Primary Assembly

    Range
    26553643..26574870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029700271.1 → XP_029556131.1  E3 ubiquitin-protein ligase CBL-like

    UniProtKB/TrEMBL
    A0A673W8U1, A0A673WBB3
    Related
    ENSSTUP00000005418.1, ENSSTUT00000005746.1
    Conserved Domains (5) summary
    cd09920
    Location:239 → 335
    SH2_Cbl-b_TKB; Src homology 2 (SH2) domain found in the Cbl-b TKB domain
    cd14393
    Location:821 → 860
    UBA_c-Cbl; UBA domain found in E3 ubiquitin-protein ligase Cbl and similar proteins
    cd16709
    Location:345 → 410
    RING-HC_Cbl-b; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Cbl-b and similar proteins
    pfam02262
    Location:37 → 155
    Cbl_N; CBL proto-oncogene N-terminal domain 1
    pfam02761
    Location:162 → 245
    Cbl_N2; CBL proto-oncogene N-terminus, EF hand-like domain
Nucleotide Protein
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