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LOC115153797 inhibitor of apoptosis protein-like [ Salmo trutta (river trout) ]

Gene ID: 115153797, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115153797
Gene description
inhibitor of apoptosis protein-like
See related
Ensembl:ENSSTUG00000008480
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115153797 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
17
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 19 NC_042975.1 (631576..689192)

Chromosome 19 - NC_042975.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 300 Neighboring gene transcriptional coactivator YAP1-like Neighboring gene uncharacterized LOC115153799 Neighboring gene 60S ribosomal protein L23a Neighboring gene HEAT repeat containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042975.1 Chromosome 19 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inhibitor of apoptosis protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042975.1 Reference fSalTru1.1 Primary Assembly

    Range
    631576..689192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029699383.1 → XP_029555243.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A673XEB1, A0A673XEG9
    Related
    ENSSTUP00000019337.1, ENSSTUT00000020334.1

  2. XM_029699384.1 → XP_029555244.1  inhibitor of apoptosis protein-like isoform X2

    UniProtKB/TrEMBL
    A0A673XEP3
    Conserved Domains (4) summary
    cd00022
    Location:301 → 368
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:416 → 465
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    pfam00653
    Location:195 → 259
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:479 → 538
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
Heading Accession and Version

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