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LOC115153561 zinc finger protein 665-like [ Salmo trutta (river trout) ]

Gene ID: 115153561, updated on 16-Nov-2020

Summary

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Gene symbol
LOC115153561
Gene description
zinc finger protein 665-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115153561 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 18 NC_042974.1 (57234091..57245038)

Chromosome 18 - NC_042974.1Genomic Context describing neighboring genes Neighboring gene sn1-specific diacylglycerol lipase beta-like Neighboring gene zinc finger protein 709-like Neighboring gene ER lumen protein-retaining receptor 2 Neighboring gene methyltransferase 9, His-X-His N1-histidine

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042974.1 Chromosome 18 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein 665-like; zinc finger protein 841-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042974.1 Reference fSalTru1.1 Primary Assembly

    Range
    57234091..57245038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029699144.1 → XP_029555004.1  zinc finger protein 841-like isoform X1

  2. XM_029699145.1 → XP_029555005.1  zinc finger protein 665-like isoform X2

    Conserved Domains (3) summary
    COG5048
    Location:451 → 872
    COG5048; FOG: Zn-finger [General function prediction only]
    cd11657
    Location:22 → 210
    TIN2_N; N-terminal domain of TRF-interacting nuclear factor 2; shelterin complex protein of telomeres
    sd00017
    Location:773 → 792
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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