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ctbp2a C-terminal binding protein 2a [ Salmo trutta (river trout) ]

Gene ID: 115153243, updated on 17-Mar-2024

Summary

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Gene symbol
ctbp2a
Gene description
C-terminal binding protein 2a
See related
Ensembl:ENSSTUG00000043961
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Also known as
ctbp2
Orthologs
zebrafish all
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Genomic context

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See ctbp2a in Genome Data Viewer
Location:
chromosome: 18
Exon count:
16
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 18 NC_042974.1 (36223827..36346365)

Chromosome 18 - NC_042974.1Genomic Context describing neighboring genes Neighboring gene erythroid differentiation-related factor 1-like Neighboring gene testis expressed 36 Neighboring gene zinc finger RANBP2-type containing 1 Neighboring gene abraxas 2, BRISC complex subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042974.1 Chromosome 18 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2
Names
C-terminal binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042974.1 Reference fSalTru1.1 Primary Assembly

    Range
    36223827..36346365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029698479.1 → XP_029554339.1  C-terminal-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A674DT62
    Related
    ENSSTUP00000098459.1, ENSSTUT00000105700.1
    Conserved Domains (1) summary
    cd05299
    Location:56 → 374
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_029698482.1 → XP_029554342.1  C-terminal-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A674DT62
    Related
    ENSSTUP00000098373.1, ENSSTUT00000105609.1

  3. XM_029698480.1 → XP_029554340.1  C-terminal-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A674DT62
    Conserved Domains (1) summary
    cd05299
    Location:56 → 374
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_029698478.1 → XP_029554338.1  C-terminal-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A674DRT6

  5. XM_029698477.1 → XP_029554337.1  C-terminal-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A674DRT6
    Related
    ENSSTUP00000098722.1, ENSSTUT00000105970.1

  6. XM_029698475.1 → XP_029554335.1  C-terminal-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A674DRT6, A0A674DSG3
    Related
    ENSSTUP00000098668.1, ENSSTUT00000105914.1
    Conserved Domains (1) summary
    cd05299
    Location:682 → 1000
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  7. XM_029698483.1 → XP_029554343.1  C-terminal-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A674DT62
    Related
    ENSSTUP00000098749.1, ENSSTUT00000105995.1
    Conserved Domains (1) summary
    cd05299
    Location:22 → 340
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

RNA

  1. XR_003867666.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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