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LOC115152362 glucoside xylosyltransferase 1-like [ Salmo trutta (river trout) ]

Gene ID: 115152362, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115152362
Gene description
glucoside xylosyltransferase 1-like
See related
Ensembl:ENSSTUG00000031535
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 17 NC_042973.1 (50931186..50947147)

Chromosome 17 - NC_042973.1Genomic Context describing neighboring genes Neighboring gene periphilin-1-like Neighboring gene YY1-associated factor 2 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene PDZ domain-containing RING finger protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042973.1 Chromosome 17 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042973.1 Reference fSalTru1.1 Primary Assembly

    Range
    50931186..50947147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029697154.1 → XP_029553014.1  glucoside xylosyltransferase 1-like isoform X3

    UniProtKB/TrEMBL
    A0A674BLA1
    Related
    ENSSTUP00000072209.1, ENSSTUT00000076624.1
    Conserved Domains (1) summary
    cd06430
    Location:127 → 401
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  2. XM_029697152.1 → XP_029553012.1  glucoside xylosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A674BLN2

  3. XM_029697153.1 → XP_029553013.1  glucoside xylosyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A674BLN2, A0A674BMD4
    Related
    ENSSTUP00000072191.1, ENSSTUT00000076607.1
Nucleotide Protein
Heading Accession and Version

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