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LOC115151575 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like [ Salmo trutta (river trout) ]

Gene ID: 115151575, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115151575
Gene description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like
See related
Ensembl:ENSSTUG00000039756
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115151575 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 17 NC_042973.1 (11056730..11091638)

Chromosome 17 - NC_042973.1Genomic Context describing neighboring genes Neighboring gene TNNI3 interacting kinase Neighboring gene leucine-rich repeat-containing protein 4B-like Neighboring gene solute carrier family 44 member 5 Neighboring gene prostaglandin F receptor (FP) Neighboring gene basic transcription factor 3-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042973.1 Chromosome 17 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042973.1 Reference fSalTru1.1 Primary Assembly

    Range
    11056730..11091638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029695619.1 → XP_029551479.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like

    UniProtKB/TrEMBL
    A0A674D4J3
    Related
    ENSSTUP00000090559.1, ENSSTUT00000096311.1
    Conserved Domains (1) summary
    pfam00777
    Location:70 → 254
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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Molecular Biology Databases