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LOC115150936 cytokine-inducible SH2-containing protein-like [ Salmo trutta (river trout) ]

Gene ID: 115150936, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115150936
Gene description
cytokine-inducible SH2-containing protein-like
See related
Ensembl:ENSSTUG00000048396
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 16 NC_042972.1 (49442264..49446487)

Chromosome 16 - NC_042972.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein 82 Neighboring gene twinfilin-2-like Neighboring gene GATOR complex protein NPRL2 Neighboring gene zinc finger MYND domain-containing protein 10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042972.1 Chromosome 16 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine-inducible SH2-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042972.1 Reference fSalTru1.1 Primary Assembly

    Range
    49442264..49446487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029694783.1 → XP_029550643.1  cytokine-inducible SH2-containing protein-like

    UniProtKB/TrEMBL
    A0A674ELF4, A0A674ELF9
    Related
    ENSSTUP00000108946.1, ENSSTUT00000116683.1
    Conserved Domains (2) summary
    smart00969
    Location:188 → 221
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:57 → 144
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases