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LOC115148478 C-terminal-binding protein 1-like [ Salmo trutta (river trout) ]

Gene ID: 115148478, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115148478
Gene description
C-terminal-binding protein 1-like
See related
Ensembl:ENSSTUG00000011088
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115148478 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 15 NC_042971.1 (11438695..11456300, complement)

Chromosome 15 - NC_042971.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115149627 Neighboring gene uncharacterized LOC115148217 Neighboring gene family with sequence similarity 53 member C Neighboring gene uncharacterized LOC115148218

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042971.1 Chromosome 15 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042971.1 Reference fSalTru1.1 Primary Assembly

    Range
    11438695..11456300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029690392.1 → XP_029546252.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A673XWC8
    Related
    ENSSTUP00000025644.1, ENSSTUT00000026874.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_029690393.1 → XP_029546253.1  C-terminal-binding protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0A673XWB9, A0A673XWC8
    Related
    ENSSTUP00000025691.1, ENSSTUT00000026924.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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