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slc25a20 solute carrier family 25 member 20 [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115142902, updated on 8-May-2024

Summary

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Gene symbol
slc25a20
Gene description
solute carrier family 25 member 20
See related
EnsemblRapid:ENSONEG00000001876
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See slc25a20 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
9
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG15 NC_088410.1 (54714375..54720556)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG15 NC_042549.1 (24411420..24417620)

Linkage Group LG15 - NC_088410.1Genomic Context describing neighboring genes Neighboring gene NCK-interacting protein with SH3 domain-like Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha, B Neighboring gene msx2-interacting protein-like Neighboring gene filamin binding LIM protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088410.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    54714375..54720556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029682733.2 → XP_029538593.1  mitochondrial carnitine/acylcarnitine carrier protein

    Related
    ENSONEP00000003763.1
    Conserved Domains (1) summary
    pfam00153
    Location:105 → 197
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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