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LOC115141912 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115141912, updated on 8-May-2024

Summary

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Gene symbol
LOC115141912
Gene description
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like
See related
EnsemblRapid:ENSONEG00000007054
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC115141912 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
14
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG14 NC_088409.1 (76468277..76540571, complement)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG14 NC_042548.1 (44636186..44708085, complement)

Linkage Group LG14 - NC_088409.1Genomic Context describing neighboring genes Neighboring gene ATP-sensitive inward rectifier potassium channel 1-like Neighboring gene G protein-activated inward rectifier potassium channel 4-like Neighboring gene uncharacterized LOC115142197 Neighboring gene SRP receptor subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088409.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    76468277..76540571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029681299.2 → XP_029537159.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like

    Related
    ENSONEP00000014339.1
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 331
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_065000430.1 → XP_064856502.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like

RNA

  1. XR_010458536.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases