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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115139492, updated on 9-May-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
See related
EnsemblRapid:ENSONEG00000001351
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
8
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG13 NC_088408.1 (37550900..37619885, complement)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG13 NC_042547.1 (17940245..18009302, complement)

Linkage Group LG13 - NC_088408.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115140506 Neighboring gene probable ribonuclease ZC3H12D Neighboring gene uncharacterized LOC135574688 Neighboring gene cyclin-dependent kinase 19 Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088408.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    37550900..37619885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029676956.2 → XP_029532816.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  2. XM_029676960.2 → XP_029532820.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X5

  3. XM_029676959.2 → XP_029532819.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

  4. XM_029676958.2 → XP_029532818.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

  5. XM_029676957.2 → XP_029532817.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

  6. XM_029676954.2 → XP_029532814.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  7. XM_029676967.2 → XP_029532827.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X11

  8. XM_029676965.2 → XP_029532825.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X10

  9. XM_029676964.2 → XP_029532824.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X9

  10. XM_029676963.2 → XP_029532823.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X8

  11. XM_029676962.2 → XP_029532822.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X7

  12. XM_029676961.2 → XP_029532821.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X6

  13. XM_029676969.2 → XP_029532829.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X12

  14. XM_029676968.2 → XP_029532828.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X12

  15. XM_029676971.2 → XP_029532831.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X12

  16. XM_029676970.2 → XP_029532830.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X12

Nucleotide Protein
Heading Accession and Version

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