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LOC115138477 solute carrier family 2, facilitated glucose transporter member 1-like [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115138477, updated on 18-Sep-2024

Summary

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Gene symbol
LOC115138477
Gene description
solute carrier family 2, facilitated glucose transporter member 1-like
See related
EnsemblRapid:ENSONEG00000018536
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC115138477 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
12
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG2 NC_088397.1 (57698972..57719567)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG2 NC_042536.1 (34487337..34507950)

Linkage Group LG2 - NC_088397.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SAM domain-containing protein 1A-like Neighboring gene T-complex protein 11 homolog Neighboring gene polyhomeotic-like protein 2 Neighboring gene rap1 GTPase-activating protein 1-like Neighboring gene protein-arginine deiminase type-2-like Neighboring gene leucine-rich repeats and immunoglobulin-like domains 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-glucose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-glucose import IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dehydroascorbic acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to insulin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 2, facilitated glucose transporter member 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088397.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    57698972..57719567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029675353.2 → XP_029531213.2  solute carrier family 2, facilitated glucose transporter member 1-like isoform X1

  2. XM_029675362.2 → XP_029531222.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X2

    Related
    ENSONEP00000044918.1
    Conserved Domains (1) summary
    cd17431
    Location:14 → 458
    MFS_GLUT_Class1; Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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