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poglut1 protein O-glucosyltransferase 1 [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115129773, updated on 8-May-2024

Summary

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Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
See related
EnsemblRapid:ENSONEG00000036627
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See poglut1 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
10
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG5 NC_088400.1 (61407151..61412636, complement)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG5 NC_042539.1 (35281198..35286660, complement)

Linkage Group LG5 - NC_088400.1Genomic Context describing neighboring genes Neighboring gene claudin-10-like Neighboring gene ATP-binding cassette sub-family C member 4-like Neighboring gene ATP-binding cassette sub-family C member 4-like Neighboring gene complex I assembly factor TIMMDC1, mitochondrial Neighboring gene calsequestrin-2-like Neighboring gene vang-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088400.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    61407151..61412636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029660474.2 → XP_029516334.1  protein O-glucosyltransferase 1

    Related
    ENSONEP00000083485.1
    Conserved Domains (1) summary
    cl23835
    Location:48 → 382
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
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Gene LinkOut

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