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MYCTH_2079097 glycoside hydrolase family 16 protein [ Thermothelomyces thermophilus ATCC 42464 ]

Gene ID: 11512585, updated on 26-Jun-2024

Summary

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Gene symbol
MYCTH_2079097
Gene description
glycoside hydrolase family 16 protein
Locus tag
MYCTH_2079097
See related
FungiDB:MYCTH_2079097; VEuPathDB:MYCTH_2079097
Gene type
protein coding
RNA name
glycoside hydrolase family 16 protein
RefSeq status
PROVISIONAL
Organism
Thermothelomyces thermophilus ATCC 42464 (strain: ATCC 42464, culture-collection: ATCC:42464)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothelomyces
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Genomic context

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See MYCTH_2079097 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_016474.1 (358666..361034, complement)

Chromosome 3 - NC_016474.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016474.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Berka RM, et al. Nat Biotechnol, 2011 Oct 2. PMID 21964414
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoside hydrolase family 16 protein
XP_003662509.1
  • CAZy_ID 267797

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016474.1 Reference assembly

    Range
    358666..361034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003662461.1 → XP_003662509.1  glycoside hydrolase family 16 protein [Thermothelomyces thermophilus ATCC 42464]

    See identical proteins and their annotated locations for XP_003662509.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G2QC37
    Conserved Domains (2) summary
    cd02183
    Location:90 → 298
    GH16_fungal_CRH1_transglycosylase; glycosylphosphatidylinositol-glucanosyltransferase
    cl16916
    Location:25 → 70
    ChtBD1; Hevein or type 1 chitin binding domain
Nucleotide Protein
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