U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC115122299 mannose-binding protein C-like [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115122299, updated on 9-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC115122299
Gene description
mannose-binding protein C-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC115122299 in Genome Data Viewer
Location:
chromosome: LG26
Exon count:
6
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG26 NC_088421.1 (46145488..46151770)
100 previous assembly Oner_1.0 (GCF_006149115.1) Unplaced Scaffold NW_021802311.1 (33..1340, complement)

Linkage Group LG26 - NC_088421.1Genomic Context describing neighboring genes Neighboring gene protein sidekick-2-like Neighboring gene cdc42 effector protein 4-like Neighboring gene peripheral myelin protein 22-like Neighboring gene toll-like receptor 13

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent conferring tensile strength IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mannose-binding protein C-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088421.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    46145488..46151770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065010836.1 → XP_064866908.1  mannose-binding protein C-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases