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alg9 ALG9 alpha-1,2-mannosyltransferase [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115115648, updated on 8-May-2024

Summary

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Gene symbol
alg9
Gene description
ALG9 alpha-1,2-mannosyltransferase
See related
EnsemblRapid:ENSONEG00000010167
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See alg9 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
16
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG10 NC_088405.1 (102652406..102719581)
100 previous assembly Oner_1.0 (GCF_006149115.1) Unplaced Scaffold NW_021783838.1 (67264..133497, complement)

Linkage Group LG10 - NC_088405.1Genomic Context describing neighboring genes Neighboring gene nectin-1-like Neighboring gene MIA SH3 domain containing Neighboring gene cilia and flagella associated protein 68 Neighboring gene dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088405.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    102652406..102719581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065024027.1 → XP_064880099.1  alpha-1,2-mannosyltransferase ALG9 isoform X1

  2. XM_065024028.1 → XP_064880100.1  alpha-1,2-mannosyltransferase ALG9 isoform X2

  3. XM_065024030.1 → XP_064880102.1  alpha-1,2-mannosyltransferase ALG9 isoform X3

  4. XM_065024029.1 → XP_064880101.1  alpha-1,2-mannosyltransferase ALG9 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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