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LOC115107343 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115107343, updated on 8-May-2024

Summary

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Gene symbol
LOC115107343
Gene description
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC115107343 in Genome Data Viewer
Location:
chromosome: LG24
Exon count:
1
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG24 NC_088419.1 (37233704..37235990, complement)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG24 NC_042558.1 (21595719..21597181, complement)

Linkage Group LG24 - NC_088419.1Genomic Context describing neighboring genes Neighboring gene cytospin-A-like Neighboring gene uncharacterized LOC135559590 Neighboring gene uncharacterized LOC115107342 Neighboring gene disks large-associated protein 2-like Neighboring gene uncharacterized LOC135564305 Neighboring gene ribosomal protein S7 Neighboring gene kelch repeat and BTB domain-containing protein 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088419.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    37233704..37235990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029630742.2 → XP_029486602.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like

    Conserved Domains (2) summary
    pfam00852
    Location:183 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:59 → 165
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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Gene LinkOut

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