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LOC115105509 delta-sarcoglycan-like [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115105509, updated on 8-May-2024

Summary

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Gene symbol
LOC115105509
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:ENSONEG00000040719
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC115105509 in Genome Data Viewer
Location:
chromosome: LG22
Exon count:
10
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG22 NC_088417.1 (65595552..65920620, complement)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG22 NC_042556.1 (50679494..50995851, complement)

Linkage Group LG22 - NC_088417.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 7 Neighboring gene uncharacterized LOC135563806 Neighboring gene uncharacterized LOC115105511 Neighboring gene gem-associated protein 5-like Neighboring gene mitochondrial ribosomal protein L22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088417.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    65595552..65920620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029627635.2 → XP_029483495.1  delta-sarcoglycan-like

    Related
    ENSONEP00000093927.1
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_065007320.1 → XP_064863392.1  delta-sarcoglycan-like

  3. XM_029627634.2 → XP_029483494.1  delta-sarcoglycan-like

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases