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LOC115102632 telethonin-like [ Oncorhynchus nerka (sockeye salmon) ]

Gene ID: 115102632, updated on 8-May-2024

Summary

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Gene symbol
LOC115102632
Gene description
telethonin-like
See related
EnsemblRapid:ENSONEG00000020899
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus nerka
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC115102632 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
2
Annotation release Status Assembly LG Location
RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG14 NC_088409.1 (31689913..31691365, complement)
100 previous assembly Oner_1.0 (GCF_006149115.1) LG3 NC_042537.1 (5369890..5371340)

Linkage Group LG14 - NC_088409.1Genomic Context describing neighboring genes Neighboring gene taste receptor type 1 member 1-like Neighboring gene aldehyde dehydrogenase, mitochondrial-like Neighboring gene frizzled-6-like Neighboring gene collagen triple helix repeat-containing protein 1-like Neighboring gene solute carrier family 25 member 32-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac muscle tissue morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of muscle stretch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle myosin thick filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telethonin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oner_Uvic_2.0 Primary Assembly

Genomic

  1. NC_088409.1 Reference Oner_Uvic_2.0 Primary Assembly

    Range
    31689913..31691365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029622778.2 → XP_029478638.1  telethonin-like

    Related
    ENSONEP00000045667.1
    Conserved Domains (1) summary
    pfam09470
    Location:31 → 181
    Telethonin; Telethonin protein
Nucleotide Protein
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