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LOC115088660 trace amine-associated receptor 3-like [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115088660, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115088660
Gene description
trace amine-associated receptor 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
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Genomic context

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See LOC115088660 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 3 NC_042617.1 (574677317..574678306, complement)

Chromosome 3 - NC_042617.1Genomic Context describing neighboring genes Neighboring gene mitochondrial translation release factor 1 like Neighboring gene regulator of G protein signaling 17 Neighboring gene opioid receptor mu 1 Neighboring gene trace amine-associated receptor 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042617.1 Chromosome 3 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables trace-amine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trace amine-associated receptor 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042617.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    574677317..574678306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029596920.1 → XP_029452780.1  trace amine-associated receptor 3-like

    Conserved Domains (1) summary
    cd15312
    Location:2 → 288
    7tmA_TAAR2_3_4; trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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