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KLC3 kinesin light chain 3 [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115073353, updated on 17-Mar-2024

Summary

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Gene symbol
KLC3
Gene description
kinesin light chain 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
Orthologs
human mouse all
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Genomic context

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See KLC3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 11 NC_042625.1 (67633272..67667660)

Chromosome 11 - NC_042625.1Genomic Context describing neighboring genes Neighboring gene microtubule affinity regulating kinase 4 Neighboring gene uncharacterized LOC115100773 Neighboring gene creatine kinase, M-type Neighboring gene ERCC excision repair 2, TFIIH core complex helicase subunit Neighboring gene protein phosphatase 1 regulatory subunit 13 like Neighboring gene RNA polymerase I subunit G

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042625.1 Chromosome 11 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kinesin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axo-dendritic transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of kinesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin light chain 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042625.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    67633272..67667660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029571707.1 → XP_029427567.1  kinesin light chain 3 isoform X3

    Conserved Domains (3) summary
    PTZ00121
    Location:48 → 224
    PTZ00121; MAEBL; Provisional
    sd00006
    Location:332 → 360
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:331 → 406
    TPR_12; Tetratricopeptide repeat

  2. XM_029571706.1 → XP_029427566.1  kinesin light chain 3 isoform X2

  3. XM_029571708.1 → XP_029427568.1  kinesin light chain 3 isoform X4

  4. XM_029571709.1 → XP_029427569.1  kinesin light chain 3 isoform X5

    Conserved Domains (3) summary
    PTZ00121
    Location:48 → 224
    PTZ00121; MAEBL; Provisional
    sd00006
    Location:332 → 360
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:331 → 406
    TPR_12; Tetratricopeptide repeat

  5. XM_029571705.1 → XP_029427565.1  kinesin light chain 3 isoform X1

    Conserved Domains (3) summary
    PTZ00121
    Location:48 → 224
    PTZ00121; MAEBL; Provisional
    sd00006
    Location:332 → 360
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:331 → 406
    TPR_12; Tetratricopeptide repeat

  6. XM_029571710.1 → XP_029427570.1  kinesin light chain 3 isoform X6

Nucleotide Protein
Heading Accession and Version

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