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ano5b anoctamin 5b [ Cottoperca gobio ]

Gene ID: 115024251, updated on 17-Mar-2024

Summary

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Gene symbol
ano5b
Gene description
anoctamin 5b
See related
Ensembl:ENSCGOG00000002152
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
zebrafish all
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Genomic context

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See ano5b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 3 NC_041357.1 (17650161..17674484, complement)

Chromosome 3 - NC_041357.1Genomic Context describing neighboring genes Neighboring gene growth arrest-specific 2b Neighboring gene solute carrier family 17 member 6b Neighboring gene immunoglobulin superfamily, DCC subclass, member 3 Neighboring gene cartilage intermediate layer protein, nucleotide pyrophosphohydrolase Neighboring gene eukaryotic translation initiation factor 3, subunit Jb

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041357.1 Chromosome 3 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041357.1 Reference fCotGob3.1

    Range
    17650161..17674484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029455681.1 → XP_029311541.1  anoctamin-5-like isoform X2

    UniProtKB/TrEMBL
    A0A6J2RMU0
    Related
    ENSCGOP00000005042.1, ENSCGOT00000005445.1
    Conserved Domains (2) summary
    pfam04547
    Location:279 → 862
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:59 → 276
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_029455671.1 → XP_029311531.1  anoctamin-5-like isoform X1

    UniProtKB/TrEMBL
    A0A6J2RMS6
    Related
    ENSCGOP00000005035.1, ENSCGOT00000005438.1
Nucleotide Protein
Heading Accession and Version

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