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kirrel3a kirre like nephrin family adhesion molecule 3a [ Cottoperca gobio ]

Gene ID: 115019272, updated on 17-Mar-2024

Summary

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Gene symbol
kirrel3a
Gene description
kirre like nephrin family adhesion molecule 3a
See related
Ensembl:ENSCGOG00000005268
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
human zebrafish all
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Genomic context

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See kirrel3a in Genome Data Viewer
Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 14 NC_041368.1 (3872988..4026903)

Chromosome 14 - NC_041368.1Genomic Context describing neighboring genes Neighboring gene piggyBac transposable element-derived protein 4-like Neighboring gene Purkinje cell protein 4a Neighboring gene small fragment nuclease Neighboring gene CXADR-like membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041368.1 Chromosome 14 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: kin of IRRE-like protein 3
Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041368.1 Reference fCotGob3.1

    Range
    3872988..4026903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029448752.1 → XP_029304612.1  LOW QUALITY PROTEIN: kin of IRRE-like protein 3

    UniProtKB/TrEMBL
    A0A6J2R5A3
    Related
    ENSCGOP00000010437.1, ENSCGOT00000011321.1
    Conserved Domains (3) summary
    cd05759
    Location:138 → 218
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:390 → 487
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    cl11960
    Location:307 → 388
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases