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pcp4a Purkinje cell protein 4a [ Cottoperca gobio ]

Gene ID: 115019081, updated on 17-Mar-2024

Summary

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Gene symbol
pcp4a
Gene description
Purkinje cell protein 4a
See related
Ensembl:ENSCGOG00000005262
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
zebrafish all
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Genomic context

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See pcp4a in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 14 NC_041368.1 (3632213..3651597, complement)

Chromosome 14 - NC_041368.1Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 2 Neighboring gene Down syndrome cell adhesion molecule a Neighboring gene piggyBac transposable element-derived protein 4-like Neighboring gene kirre like nephrin family adhesion molecule 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041368.1 Chromosome 14 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin regulator protein PCP4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041368.1 Reference fCotGob3.1

    Range
    3632213..3651597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029448424.1 → XP_029304284.1  calmodulin regulator protein PCP4-like isoform X1

    UniProtKB/TrEMBL
    A0A6J2R1W7
    Related
    ENSCGOP00000010362.1, ENSCGOT00000011246.1

  2. XM_029448425.1 → XP_029304285.1  calmodulin regulator protein PCP4-like isoform X2

    UniProtKB/TrEMBL
    A0A6J2R4N1
    Related
    ENSCGOP00000010366.1, ENSCGOT00000011250.1
Nucleotide Protein
Heading Accession and Version

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