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chst6 carbohydrate sulfotransferase 6 [ Cottoperca gobio ]

Gene ID: 115009770, updated on 17-Mar-2024

Summary

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Gene symbol
chst6
Gene description
carbohydrate sulfotransferase 6
See related
Ensembl:ENSCGOG00000005420
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
zebrafish all
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Genomic context

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See chst6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 6 NC_041360.1 (1700860..1710373, complement)

Chromosome 6 - NC_041360.1Genomic Context describing neighboring genes Neighboring gene syntrophin, beta 2 Neighboring gene spire-type actin nucleation factor 2 Neighboring gene uncharacterized LOC115010126 Neighboring gene transmembrane protein 231 Neighboring gene GABA(A) receptor-associated protein like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041360.1 Chromosome 6 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041360.1 Reference fCotGob3.1

    Range
    1700860..1710373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029433993.1 → XP_029289853.1  carbohydrate sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A6J2PWN8
    Related
    ENSCGOP00000010809.1, ENSCGOT00000011706.1
    Conserved Domains (1) summary
    pfam13469
    Location:46 → 298
    Sulfotransfer_3; Sulfotransferase family

  2. XM_029433996.1 → XP_029289856.1  carbohydrate sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A6J2PWN8
    Conserved Domains (1) summary
    pfam13469
    Location:46 → 298
    Sulfotransfer_3; Sulfotransferase family

  3. XM_029433994.1 → XP_029289854.1  carbohydrate sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A6J2PWN8
    Conserved Domains (1) summary
    pfam13469
    Location:46 → 298
    Sulfotransfer_3; Sulfotransferase family

  4. XM_029433995.1 → XP_029289855.1  carbohydrate sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A6J2PWN8
    Conserved Domains (1) summary
    pfam13469
    Location:46 → 298
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
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