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slc25a20 solute carrier family 25 member 20 [ Cottoperca gobio ]

Gene ID: 115008044, updated on 17-Mar-2024

Summary

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Gene symbol
slc25a20
Gene description
solute carrier family 25 member 20
See related
Ensembl:ENSCGOG00000023641
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
human zebrafish all
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Genomic context

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See slc25a20 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 5 NC_041359.1 (16983318..16988636)

Chromosome 5 - NC_041359.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor Neighboring gene NCK interacting protein with SH3 domain Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha, B Neighboring gene msx2-interacting protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041359.1 Chromosome 5 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041359.1 Reference fCotGob3.1

    Range
    16983318..16988636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029431302.1 → XP_029287162.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A6J2PPZ3
    Related
    ENSCGOP00000053984.1, ENSCGOT00000057527.1
    Conserved Domains (1) summary
    pfam00153
    Location:107 → 198
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_003832269.1 RNA Sequence

  2. XR_003832268.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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