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st6galnac5b ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b [ Cottoperca gobio ]

Gene ID: 115006577, updated on 17-Mar-2024

Summary

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Gene symbol
st6galnac5b
Gene description
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b
See related
Ensembl:ENSCGOG00000014549
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
zebrafish all
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Genomic context

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See st6galnac5b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 4 NC_041358.1 (24757961..24779255)

Chromosome 4 - NC_041358.1Genomic Context describing neighboring genes Neighboring gene LIM homeobox 8 Neighboring gene solute carrier family 44 member 5b Neighboring gene prostaglandin F receptor (FP) Neighboring gene basic transcription factor 3-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041358.1 Chromosome 4 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041358.1 Reference fCotGob3.1

    Range
    24757961..24779255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029428850.1 → XP_029284710.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like

    UniProtKB/TrEMBL
    A0A6J2PGK6
    Related
    ENSCGOP00000031114.1, ENSCGOT00000033478.1
    Conserved Domains (1) summary
    pfam00777
    Location:84 → 266
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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Molecular Biology Databases