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slc35b2 solute carrier family 35 member B2 [ Cottoperca gobio ]

Gene ID: 115003808, updated on 17-Mar-2024

Summary

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Gene symbol
slc35b2
Gene description
solute carrier family 35 member B2
See related
Ensembl:ENSCGOG00000020052
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
human zebrafish all
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Genomic context

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See slc35b2 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
4
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 24 NC_041378.1 (5539742..5546059, complement)

Chromosome 24 - NC_041378.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 25b Neighboring gene heat shock protein 90, alpha (cytosolic), class B member 1 Neighboring gene nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon Neighboring gene transmembrane protein 151Ba

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041378.1 Chromosome 24 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenosine 3'-phospho 5'-phosphosulfate transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041378.1 Reference fCotGob3.1

    Range
    5539742..5546059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029425737.1 → XP_029281597.1  adenosine 3'-phospho 5'-phosphosulfate transporter 1

    UniProtKB/TrEMBL
    A0A6J2P8L8
    Related
    ENSCGOP00000044704.1, ENSCGOT00000047742.1
    Conserved Domains (1) summary
    pfam08449
    Location:114 → 416
    UAA; UAA transporter family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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